Properties are selected based on real traveler reviews and popularity among guests who’ve booked a night in Boothbay Harbor on Hotels.com. These Boothbay Harbor hotels consistently deliver on comfort, location and traveler experience. Last updated on .
Hotels in Boothbay Harbor
Free cancellation options if plans change
Unlock travel rewards with One Key
Save more with Member Prices
Check prices for these dates
Top 5 hotels in Boothbay Harbor at a glance
- Flagship Inn and Suites — 2.5-star hotel in Boothbay Harbor. Guest rating: 8.0/10 — Very Good.
- Tugboat Inn — 3-star hotel in Boothbay Harbor. Guest rating: 9.0/10 — Wonderful.
- Ocean Gate Inn — 3-star hotel in Southport. Guest rating: 8.6/10 — Excellent.
- Fishermans Wharf Inn — 2.5-star hotel in Boothbay Harbor. Guest rating: 8.6/10 — Excellent.
- Boothbay Harbor Inn — 2.5-star hotel in Boothbay Harbor. Guest rating: 8.4/10 — Very Good.
Where to stay in Boothbay Harbor?
Flagship Inn and Suites
Flagship Inn and SuitesBoothbay Harbor
8.0 out of 10, Very Good, (1,003 reviews)
"The room was immaculate. I told the front desk staff."
Judy L.
$171 nightly
The price is $186
Jun 28 - Jun 29
Total with taxes and fees
Tugboat Inn
Tugboat InnBoothbay Harbor
9.0 out of 10, Wonderful, (1,000 reviews)
"Perfect place to call home For a night spectacular vibes and views."
Taylar
3 days ago
$255 nightly
The price is $278
Jul 7 - Jul 8
Total with taxes and fees
Ocean Gate Inn
Ocean Gate InnSouthport
8.6 out of 10, Excellent, (1,002 reviews)
"The staff that we met were wonderful."
Tammi
$227 nightly
The price is $247
Jun 25 - Jun 26
Total with taxes and fees
Fishermans Wharf Inn
Fishermans Wharf InnBoothbay Harbor
8.6 out of 10, Excellent, (902 reviews)
"Good business center to use. Room was clean. Bed was comfortable."
Elizabeth
19 days ago
$255 nightly
The price is $278
Jul 6 - Jul 7
Total with taxes and fees
Boothbay Harbor Inn
Boothbay Harbor InnBoothbay Harbor
8.4 out of 10, Very Good, (1,000 reviews)
"The staff was welcoming at check in most helpful."
Gwen
$225 nightly
The price is $245
Jun 30 - Jul 1
Total with taxes and fees
Spruce Point Inn
Spruce Point InnBoothbay Harbor
8.8 out of 10, Excellent, (408 reviews)
"It was very relaxing. Everyone who worked there was very pleasant."
Emily
$401 nightly
The price is $437
Jun 25 - Jun 26
Total with taxes and fees
Harborage Inn on the Oceanfront
Harborage Inn on the OceanfrontBoothbay Harbor
9.6 out of 10, Exceptional, (232 reviews)
"Property was very well kept. The Inn Keepers were very attentive."
John
20 days ago
$306 nightly
The price is $333
Jun 29 - Jun 30
Total with taxes and fees
Topside Inn
Topside InnBoothbay Harbor
9.8 out of 10, Exceptional, (110 reviews)
"With good amenities. With great service. Staff is very welcoming."
Alexei
6 days ago
$398 nightly
The price is $434
Jun 28 - Jun 29
Total with taxes and fees
Linekin Bay Resort
Linekin Bay ResortBoothbay Harbor
9.2 out of 10, Wonderful, (211 reviews)
"Loved our 2 night visit. Enjoyed the beautiful gardens. The pool was amazing."
Deborah
11 days ago
$315 nightly
The price is $343
Jun 28 - Jun 29
Total with taxes and fees
Newagen Seaside Inn
Newagen Seaside InnSouthport
9.4 out of 10, Exceptional, (347 reviews)
"The gem of Southport Maine. Home away from home in an idyllic setting."
sharyn
4 days ago
$242 nightly
The price is $263
Jun 25 - Jun 26
Total with taxes and fees
Harbour Towne Inn on the Waterfront
Harbour Towne Inn on the WaterfrontBoothbay Harbor
9.6 out of 10, Exceptional, (79 reviews)
"This was a wonderful place to stay. Even giving me fresh baked cookies."
Karen
$384 nightly
The price is $418
Jun 25 - Jun 26
Total with taxes and fees
Boothbay Harbor Oceanside Inn
Boothbay Harbor Oceanside InnBoothbay Harbor
9.2 out of 10, Wonderful, (29 reviews)
"The beds were wonderful the finishings in the room were beautiful."
Tammi
Atlantic Ark Inn
Atlantic Ark InnBoothbay Harbor
9.0 out of 10, Wonderful, (56 reviews)
"Staff was terrific. Atlantic Ark is in a great location."
Anonymous traveler
Captain Sawyer's Bed & Breakfast
Captain Sawyer's Bed & BreakfastBoothbay Harbor
9.2 out of 10, Wonderful, (127 reviews)
"Breakfast was very nice. Easy access to the nice porch."
laura
4 days ago
Smuggler's Cove Inn
Smuggler's Cove InnEast Boothbay
9.0 out of 10, Wonderful, (480 reviews)
"I enjoyed my stay at Smugglers Inn. The breakfast was very good."
Ian
1 day ago
$252 nightly
The price is $275
Jun 29 - Jun 30
Total with taxes and fees
Bluebird Ocean Point Inn
Bluebird Ocean Point InnOcean Point
8.8 out of 10, Excellent, (566 reviews)
"Beautiful coastal location. Dinner was great. We loved our stay."
Robert
6 days ago
$223 nightly
The price is $243
Jun 25 - Jun 26
Total with taxes and fees
Blue Heron Seaside Inn
Blue Heron Seaside InnBoothbay Harbor
9.8 out of 10, Exceptional, (25 reviews)
"It was everything one could hope."
Laura
Mid-Town Motel
Mid-Town MotelBoothbay Harbor
8.8 out of 10, Excellent, (234 reviews)
"Great little motel. It was conveniently located next to Boothbay Harbor."
Dianna
2 days ago
$146 nightly
The price is $159
Jun 25 - Jun 26
Total with taxes and fees
Admirals Quarters Inn
Admirals Quarters InnBoothbay Harbor
9.4 out of 10, Exceptional, (30 reviews)
"Jersey gave us top notch recommendations for restaurants. The property was beautiful."
Izzy
$531 nightly
The price is $579
Jun 25 - Jun 26
Total with taxes and fees
Greenleaf Inn
Greenleaf InnBoothbay Harbor
9.2 out of 10, Wonderful, (16 reviews)
"The upgrades they made at this hotel have been amazing."
William
$548 nightly
The price is $597
Jun 26 - Jun 27
Total with taxes and fees
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Get last-minute hotel deals in Boothbay Harbor and save more
Sign in to unlock great savings.
Showing deals for:Jun 24 - Jun 25
9.4 out of 10, Exceptional, (965 reviews)
$219 nightly
The price is $238
Total with taxes and fees
Check out hotels with a pool in Boothbay Harbor
8.8 out of 10, Excellent, (566)
$223 nightly
The price is $243
Jun 25 - Jun 26
Total with taxes and fees
You may also like pet-friendly hotels in Boothbay Harbor
9.4 out of 10, Exceptional, (965)
$182 nightly
The price is $199
Jun 30 - Jul 1
Total with taxes and fees
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Go beyond your typical stay in Boothbay Harbor
Pet friendly
Top landmarks in Boothbay Harbor
Boothbay Harbor and related destinations
Cruise past lobster boats in the harbor where captains haul traps with practiced efficiency. The Coastal Maine Botanical Gardens dazzle with native plantings that thrive despite stubborn winters. At waterfront restaurants, order the catch of the day that likely swam past your table that morning. The Opera House hosts performances in a century-old building. Barrett Park offers front-row seats to the harbor's daily ballet of sailboats and fishing vessels. Burnt Island Living Lighthouse lets you experience keeper life. For the best harbor views, hike the Boothbay Region Land Trust trails where the forest opens to reveal vistas that explain why artists have flocked here for generations.
Check out reviews of Boothbay Harbor hotels guests love
Fishermans Wharf Inn
10/10 Excellent
Frequently asked questions
Keep exploring
- Pemaquid Beach Hotels
- Arrowsic Hotels
- Cundys Harbor Hotels
- Walpole Hotels
- Woolwich Hotels
- Squirrel Island Hotels
- Trevett Hotels
- Hotels near Markings Gallery
- Hotels near Georgetown Pottery
- Hotels near Boothbay Region Land Trust
- Hotels near Boothbay Farmers' Market
- Hotels near Carousel Music Theater
- Hotels near Dolphin Mini Golf
- Hotels near Montsweag Flea Market
- Hotels near Monkey C Monkey Do
- Hotels near Pemaquid Craft Co-op
- Hotels near La Verna Preserve
- Hotels near Jan Kilburn Watercolor Studio and Gallery
- Hotels with Parking near Pemaquid Beach Park
- Cottages in Pemaquid Beach Park
- Apartments in Pemaquid Beach Park
- B&B in Pemaquid Beach Park
- Cheap Hotels near Pemaquid Beach Park
- 3 Star Hotels in Pemaquid Beach Park
- Lgbtqia-Welcoming Hotels near Pemaquid Beach Park
- Family Hotels near Pemaquid Beach Park
- Hotels near Pemaquid Beach Park
- Hotels near Doubling Point Lighthouse
- South Bristol Hotels
- Hotels near Wiscasset
- Hotels near Popham Beach
- Harpswell Hotels
- Westport Hotels
- Hotels near Juniper Point
- Hotels near Half Mile Beach
- Hotels near Grimes Cove Beach
- Sebasco Hotels
- Hotels near Hendricks Head Beach
- Sheepscot Hotels
- West Boothbay Harbor Hotels
- Yellow Head Hotels
- Five Islands Hotels
- Bayville Hotels
- Hotels near Fort Point
- Hotels near Hodgdon Island
- West Bath Hotels
- Sebascodegan Island Hotels
- Hotels near Brooks Point
- Hotels near Little Point
- Hotels near Mid Coast Hospital
- Old Orchard Beach Hotels
- Southport Hotels
- Bristol Hotels
- Brunswick Hotels
- Damariscotta Hotels
- Freeport Hotels
- Georgetown Hotels
- Wiscasset Hotels
- East Boothbay Hotels
- Bath Hotels
- Edgecomb Hotels
- Boothbay Hotels
- Round Pond Hotels
- New Harbor Hotels
- Newcastle Hotels
- Phippsburg Hotels
- Bar Harbor Hotels
- Portland Hotels
- Hotels near Coastal Maine Botanical Gardens
- Hotels near Barrett Park
- Hotels near Boothbay Railway Village
- Hotels near Burnt Island Living Lighthouse
- Hotels near Maine Maritime Museum
- Hotels near Popham Beach State Park
- West Southport Hotels
- Newagen Hotels
- Hotels near Pemaquid Point Lighthouse Park
- Hotels near Seguin Island Lighthouse
- Hotels near Chocolate Church
- Hotels near Bath Visitor Information Center
- Hotels near Josephine Newman Audubon Sanctuary
- Hotels near Reid State Park
- Hotels near Thomas Point Beach
- Hotels near Maine State Aquarium
- Hotels near Opera House at Boothbay Harbor
- Hotels near Colonial Pemaquid State Historic Site
- Sebasco Estates Hotels
- Damariscove Island Hotels
- Hotels near Hunnewell Beach
- Popham Beach Hotels
- Ocean Point Hotels
- Pemaquid Point Hotels
- Pemaquid Harbor Hotels
- Christmas Cove Hotels
- Pemaquid Hotels
- Small Point Hotels
- Sabino Hotels
- Lincoln County Hotels
- Sagadahoc County Hotels
- Barters Island Hotels